Understanding the real costs of selling online starts with knowing how Amazon vs Shopify structures their fees. Amazon follows a usage-based pricing model. Each item sold incurs referral fees, which typically range from 8% to 15% depending on the product category. Some niche categories go even higher. On top of that, sellers using Amazon FBA must budget for fulfillment fees, storage fees, and long-term inventory surcharges if products sit too long in the warehouse. A Professional Amazon seller account costs $39.99/month, while the Individual account has no monthly subscription fee but charges $0.99 per sale. That can add up fast for high-volume sellers, especially when factoring in Amazon Pay transaction deductions.
Shopify offers a different approach through a tiered ecommerce platform pricing structure. Shopify Starter begins at just $5/month, ideal for those testing the waters. Basic Shopify starts at $39/month, with Advanced Shopify reaching $399/month and offering robust features for scaling brands. These Shopify plans differ not only in access to tools but also in the transaction fees. Using Shopify Payments—their native gateway—eliminates extra charges, while using external processors can add up to 2% per transaction. In contrast to Amazon vs Shopify, Shopify store owners avoid paying referral fees, retaining more control over pricing and profit margins.
Another key point in the Shopify vs Amazon cost comparison is fulfillment. Amazon FBA charges sellers for storing, picking, packing, and shipping products. These expenses may be worth it for access to Prime shipping and Amazon’s logistical network. However, Shopify shipping options include integration with third-party logistics providers and shipping discounts for major carriers. Sellers benefit from lower fulfillment costs and more flexibility, especially if they manage an own store with custom packaging or want to maintain tight control over customer experience.
To choose wisely between Shopify and Amazon, calculate your expected item sold volume and average order value. A seller moving 10–15 products per day with low profit margins might find Amazon’s referral fee structure burdensome, especially when paired with fulfillment fees. On the other hand, high-margin or high-ticket sellers could justify the cost due to Amazon’s vast customer base and unmatched marketplace visibility. Meanwhile, merchants who focus on brand development, retain customer data, and value direct communication—through shopify email, abandoned cart recovery, and marketing apps—often prefer the Shopify marketplace model. Over time, this builds stronger customer relationships and boosts brand visibility.
Ultimately, both ecommerce platforms serve different pricing needs and business goals. Whether you're optimizing for lean startup costs or long-term brand equity, analyzing your cost structure is non-negotiable. Every referral fee, every monthly fee, every transaction fee affects your margins—and your ability to sell online at scale.
Shopify pricing